Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pdx1P52946 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.03□□□□□ -0.48
Pdx1P52946 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.03□□□□□ -0.48
Pdx1P52946 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.03□□□□□ -0.48
Pdx1P52946 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pdx1P52946 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Pdx1P52946 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pdx1P52946 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pdx1P52946 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.03□□□□□ -0.48
Pdx1P52946 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdx1P52946 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.02□□□□□ -0.48
Pdx1P52946 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pdx1P52946 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pdx1P52946 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pdx1P52946 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdx1P52946 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Pdx1P52946 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Pdx1P52946 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Pdx1P52946 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.02□□□□□ -0.49
Pdx1P52946 Gm11989-201ENSMUST00000117240 672 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Gm11362-201ENSMUST00000118838 850 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Gm14247-201ENSMUST00000120950 237 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pdx1P52946 Gm9230-201ENSMUST00000188228 532 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Gm13097-201ENSMUST00000210722 397 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.02□□□□□ -0.49
Pdx1P52946 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdx1P52946 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.02□□□□□ -0.49
Pdx1P52946 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pdx1P52946 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pdx1P52946 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pdx1P52946 Map1b-203ENSMUST00000223725 2669 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.01□□□□□ -0.49
Pdx1P52946 Gm15276-201ENSMUST00000145953 498 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Gm25700-201ENSMUST00000177693 110 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.01□□□□□ -0.49
Pdx1P52946 Gm42599-201ENSMUST00000201308 469 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Gm19187-201ENSMUST00000206781 892 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.01□□□□□ -0.49
Pdx1P52946 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pdx1P52946 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms