Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.8□□□□□ -0.36
SftpdP50404 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.8□□□□□ -0.36
SftpdP50404 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SftpdP50404 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.8□□□□□ -0.36
SftpdP50404 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.8□□□□□ -0.36
SftpdP50404 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.8□□□□□ -0.36
SftpdP50404 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SftpdP50404 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.8□□□□□ -0.36
SftpdP50404 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.8□□□□□ -0.36
SftpdP50404 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.8□□□□□ -0.36
SftpdP50404 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SftpdP50404 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.79□□□□□ -0.36
SftpdP50404 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SftpdP50404 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Gm14247-201ENSMUST00000120950 237 ntBASIC12.79□□□□□ -0.36
SftpdP50404 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Gm15276-201ENSMUST00000145953 498 ntBASIC12.79□□□□□ -0.36
SftpdP50404 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.79□□□□□ -0.36
SftpdP50404 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 AA914427-201ENSMUST00000193194 1166 ntBASIC12.79□□□□□ -0.36
SftpdP50404 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.79□□□□□ -0.36
SftpdP50404 Gm38317-201ENSMUST00000195564 343 ntBASIC12.79□□□□□ -0.36
SftpdP50404 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.79□□□□□ -0.36
SftpdP50404 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.79□□□□□ -0.36
SftpdP50404 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Gm45598-202ENSMUST00000210719 986 ntBASIC12.79□□□□□ -0.36
SftpdP50404 Gm13097-201ENSMUST00000210722 397 ntBASIC12.79□□□□□ -0.36
SftpdP50404 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.79□□□□□ -0.36
SftpdP50404 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SftpdP50404 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.79□□□□□ -0.36
SftpdP50404 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SftpdP50404 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SftpdP50404 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SftpdP50404 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SftpdP50404 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
SftpdP50404 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.78□□□□□ -0.36
SftpdP50404 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.78□□□□□ -0.36
SftpdP50404 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpdP50404 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms