Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.07□□□□□ -0.8
Nkx2-1P50220 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.07□□□□□ -0.8
Nkx2-1P50220 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm8805-201ENSMUST00000117848 313 ntBASIC10.07□□□□□ -0.8
Nkx2-1P50220 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm8463-201ENSMUST00000208573 613 ntBASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.07□□□□□ -0.8
Nkx2-1P50220 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.07□□□□□ -0.8
Nkx2-1P50220 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-1P50220 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm11918-201ENSMUST00000121660 179 ntBASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm26185-201ENSMUST00000157692 266 ntBASIC10.06□□□□□ -0.8
Nkx2-1P50220 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm17208-201ENSMUST00000168388 535 ntBASIC10.06□□□□□ -0.8
Nkx2-1P50220 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms