Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.77□□□□□ -0.36
LmnaP48678 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.77□□□□□ -0.36
LmnaP48678 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
LmnaP48678 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
LmnaP48678 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.77□□□□□ -0.36
LmnaP48678 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LmnaP48678 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LmnaP48678 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LmnaP48678 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.77□□□□□ -0.37
LmnaP48678 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LmnaP48678 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LmnaP48678 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Matn2-203ENSMUST00000226766 3252 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LmnaP48678 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.77□□□□□ -0.37
LmnaP48678 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
LmnaP48678 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.77□□□□□ -0.37
LmnaP48678 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LmnaP48678 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LmnaP48678 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LmnaP48678 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.76□□□□□ -0.37
LmnaP48678 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.76□□□□□ -0.37
LmnaP48678 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
LmnaP48678 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LmnaP48678 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.76□□□□□ -0.37
LmnaP48678 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.76□□□□□ -0.37
LmnaP48678 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC12.76□□□□□ -0.37
LmnaP48678 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC12.76□□□□□ -0.37
LmnaP48678 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.76□□□□□ -0.37
LmnaP48678 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.76□□□□□ -0.37
LmnaP48678 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LmnaP48678 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.76□□□□□ -0.37
LmnaP48678 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LmnaP48678 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LmnaP48678 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LmnaP48678 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LmnaP48678 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LmnaP48678 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LmnaP48678 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LmnaP48678 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LmnaP48678 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms