Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx2P48379 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rfx2P48379 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rfx2P48379 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx2P48379 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx2P48379 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rfx2P48379 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Rfx2P48379 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.78□□□□□ -0.36
Rfx2P48379 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx2P48379 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.78□□□□□ -0.36
Rfx2P48379 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Mir6927-201ENSMUST00000184494 71 ntBASIC12.78□□□□□ -0.36
Rfx2P48379 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.78□□□□□ -0.36
Rfx2P48379 Gm19187-201ENSMUST00000206781 892 ntBASIC12.78□□□□□ -0.36
Rfx2P48379 Gm45433-201ENSMUST00000209386 247 ntBASIC12.78□□□□□ -0.36
Rfx2P48379 Gm45598-202ENSMUST00000210719 986 ntBASIC12.78□□□□□ -0.36
Rfx2P48379 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.78□□□□□ -0.36
Rfx2P48379 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx2P48379 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx2P48379 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Rfx2P48379 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx2P48379 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx2P48379 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx2P48379 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.77□□□□□ -0.36
Rfx2P48379 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx2P48379 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rfx2P48379 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx2P48379 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx2P48379 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx2P48379 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.77□□□□□ -0.36
Rfx2P48379 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx2P48379 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rfx2P48379 Gm12217-201ENSMUST00000118858 696 ntBASIC12.77□□□□□ -0.37
Rfx2P48379 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfx2P48379 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.77□□□□□ -0.37
Rfx2P48379 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfx2P48379 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfx2P48379 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx2P48379 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.76□□□□□ -0.37
Rfx2P48379 Map1b-203ENSMUST00000223725 2669 ntBASIC12.76□□□□□ -0.37
Rfx2P48379 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.76□□□□□ -0.37
Rfx2P48379 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.76□□□□□ -0.37
Rfx2P48379 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfx2P48379 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Mir5120-201ENSMUST00000175020 78 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms