Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox18P43680 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Gm15225-201ENSMUST00000120449 1017 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Gm11233-201ENSMUST00000122357 634 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Gm23218-201ENSMUST00000158124 276 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.86□□□□□ -0.51
Sox18P43680 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Gm20392-201ENSMUST00000173047 701 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Mir7076-201ENSMUST00000183519 74 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Mir7677-201ENSMUST00000184226 67 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Sox18P43680 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Gm20177-201ENSMUST00000203705 334 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Gm3793-201ENSMUST00000204973 672 ntBASIC11.86□□□□□ -0.51
Sox18P43680 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Gm270-201ENSMUST00000223010 976 ntBASIC11.86□□□□□ -0.51
Sox18P43680 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Zfp865-202ENSMUST00000076791 1129 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Sox18P43680 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Sox18P43680 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox18P43680 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.86□□□□□ -0.51
Sox18P43680 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox18P43680 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox18P43680 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sox18P43680 Gm15573-201ENSMUST00000119487 540 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Gm11246-201ENSMUST00000120880 345 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Gm12291-201ENSMUST00000121627 311 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Gm12628-201ENSMUST00000122193 382 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.85□□□□□ -0.51
Sox18P43680 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox18P43680 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox18P43680 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox18P43680 Gm10774-201ENSMUST00000188689 204 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Gm19931-201ENSMUST00000198920 368 ntBASIC11.85□□□□□ -0.51
Sox18P43680 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Sox18P43680 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 AC168059.2-201ENSMUST00000224473 333 ntBASIC11.85□□□□□ -0.51
Sox18P43680 AC154683.1-201ENSMUST00000228409 1284 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Snora73b-201ENSMUST00000083419 205 ntBASIC11.85□□□□□ -0.51
Sox18P43680 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sox18P43680 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox18P43680 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms