Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-2P42586 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-2P42586 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Gm5419-201ENSMUST00000119301 527 ntBASIC11.14□□□□□ -0.63
Nkx2-2P42586 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Rprl1-202ENSMUST00000198476 238 ntBASIC11.14□□□□□ -0.63
Nkx2-2P42586 Gm13097-201ENSMUST00000210722 397 ntBASIC11.14□□□□□ -0.63
Nkx2-2P42586 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-2P42586 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm15276-201ENSMUST00000145953 498 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm32999-201ENSMUST00000192693 562 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 AA914427-201ENSMUST00000193194 1166 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm17931-201ENSMUST00000208132 634 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.13□□□□□ -0.63
Nkx2-2P42586 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-2P42586 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms