Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx1-2P42580 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx1-2P42580 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gm37580-201ENSMUST00000192408 2800 ntBASIC14.94□□□□□ -0.02
Nkx1-2P42580 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gm13875-201ENSMUST00000120162 282 ntBASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.94□□□□□ -0.02
Nkx1-2P42580 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.94□□□□□ -0.02
Nkx1-2P42580 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm12058-201ENSMUST00000118614 437 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Mir1982-201ENSMUST00000157368 74 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm4034-201ENSMUST00000187674 480 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm38158-201ENSMUST00000194617 339 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm37008-201ENSMUST00000195712 319 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm43963-201ENSMUST00000203466 2488 ntBASIC14.93□□□□□ -0.02
Nkx1-2P42580 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx1-2P42580 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.92□□□□□ -0.02
Nkx1-2P42580 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx1-2P42580 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms