Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC17.83■□□□□ 0.44
Chd1P40201 AC134601.2-201ENSMUST00000221071 130 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Gm24089-201ENSMUST00000093696 109 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.83■□□□□ 0.44
Chd1P40201 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Chd1P40201 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chd1P40201 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC17.82■□□□□ 0.44
Chd1P40201 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Gm14071-201ENSMUST00000117817 509 ntBASIC17.82■□□□□ 0.44
Chd1P40201 Gm14740-201ENSMUST00000118538 1150 ntBASIC17.82■□□□□ 0.44
Chd1P40201 Gm15172-201ENSMUST00000118945 1046 ntBASIC17.82■□□□□ 0.44
Chd1P40201 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Gm6612-201ENSMUST00000170777 395 ntBASIC17.82■□□□□ 0.44
Chd1P40201 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Gm18733-202ENSMUST00000174447 401 ntBASIC17.82■□□□□ 0.44
Chd1P40201 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC17.82■□□□□ 0.44
Chd1P40201 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC17.82■□□□□ 0.44
Chd1P40201 Gm8226-201ENSMUST00000190511 798 ntBASIC17.82■□□□□ 0.44
Chd1P40201 Gm29067-201ENSMUST00000190821 470 ntBASIC17.82■□□□□ 0.44
Chd1P40201 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC17.82■□□□□ 0.44
Chd1P40201 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC17.82■□□□□ 0.44
Chd1P40201 AC154477.1-201ENSMUST00000226515 773 ntBASIC17.82■□□□□ 0.44
Chd1P40201 AC137842.2-201ENSMUST00000227734 797 ntBASIC17.82■□□□□ 0.44
Chd1P40201 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Chd1P40201 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd1P40201 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Chd1P40201 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chd1P40201 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC17.81■□□□□ 0.44
Chd1P40201 Gm9630-201ENSMUST00000178304 885 ntBASIC17.81■□□□□ 0.44
Chd1P40201 Gm7765-201ENSMUST00000182585 974 ntBASIC17.81■□□□□ 0.44
Chd1P40201 Gm27440-201ENSMUST00000184785 107 ntBASIC17.81■□□□□ 0.44
Chd1P40201 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Chd1P40201 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC17.81■□□□□ 0.44
Chd1P40201 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chd1P40201 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Gm44190-201ENSMUST00000205083 1401 ntBASIC17.81■□□□□ 0.44
Chd1P40201 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Gm13281-201ENSMUST00000120871 567 ntBASIC17.81■□□□□ 0.44
Chd1P40201 Gm11736-201ENSMUST00000121468 505 ntBASIC17.81■□□□□ 0.44
Chd1P40201 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC17.81■□□□□ 0.44
Chd1P40201 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd1P40201 Gm26782-203ENSMUST00000227103 751 ntBASIC17.81■□□□□ 0.44
Chd1P40201 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd1P40201 Gm10581-201ENSMUST00000097986 231 ntBASIC17.81■□□□□ 0.44
Chd1P40201 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC17.8■□□□□ 0.44
Chd1P40201 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chd1P40201 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Gm23439-201ENSMUST00000104292 132 ntBASIC17.8■□□□□ 0.44
Chd1P40201 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC17.8■□□□□ 0.44
Chd1P40201 Ighv1-70-201ENSMUST00000196509 351 ntBASIC17.8■□□□□ 0.44
Chd1P40201 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chd1P40201 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms