Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.03□□□□□ -0.8
Timp3P39876 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Gm26361-201ENSMUST00000158868 186 ntBASIC10.03□□□□□ -0.8
Timp3P39876 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.03□□□□□ -0.8
Timp3P39876 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Timp3P39876 Gm18827-201ENSMUST00000188341 790 ntBASIC10.03□□□□□ -0.8
Timp3P39876 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.03□□□□□ -0.8
Timp3P39876 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.03□□□□□ -0.8
Timp3P39876 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Gm10312-201ENSMUST00000078515 489 ntBASIC10.03□□□□□ -0.8
Timp3P39876 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.02□□□□□ -0.8
Timp3P39876 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Timp3P39876 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Timp3P39876 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Timp3P39876 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Timp3P39876 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Timp3P39876 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Timp3P39876 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.02□□□□□ -0.81
Timp3P39876 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Mir3102-201ENSMUST00000175555 104 ntBASIC10.02□□□□□ -0.81
Timp3P39876 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.02□□□□□ -0.81
Timp3P39876 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.02□□□□□ -0.81
Timp3P39876 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.02□□□□□ -0.81
Timp3P39876 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Timp3P39876 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Timp3P39876 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.02□□□□□ -0.81
Timp3P39876 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Timp3P39876 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Timp3P39876 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.01□□□□□ -0.81
Timp3P39876 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.01□□□□□ -0.81
Timp3P39876 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Timp3P39876 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Timp3P39876 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms