Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 n-R5s121-201ENSMUST00000177589 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s146-201ENSMUST00000177889 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Gm22109-201ENSMUST00000177995 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Gm22291-201ENSMUST00000178027 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s141-201ENSMUST00000178066 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Gm23284-201ENSMUST00000178069 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s100-201ENSMUST00000178106 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s111-201ENSMUST00000178203 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s105-201ENSMUST00000178499 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s149-201ENSMUST00000178520 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s103-201ENSMUST00000178755 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s123-201ENSMUST00000178804 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s142-201ENSMUST00000178820 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s144-201ENSMUST00000178859 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s139-201ENSMUST00000178975 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s134-201ENSMUST00000178983 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s136-201ENSMUST00000179080 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Gm25018-201ENSMUST00000179081 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s104-201ENSMUST00000179107 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s113-201ENSMUST00000179143 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s133-201ENSMUST00000179275 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s117-201ENSMUST00000179431 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Gm25212-201ENSMUST00000179432 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s138-201ENSMUST00000179476 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s122-201ENSMUST00000179500 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s143-201ENSMUST00000179542 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s107-201ENSMUST00000179704 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Gm26391-201ENSMUST00000179843 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s110-201ENSMUST00000179995 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s128-201ENSMUST00000180096 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 n-R5s124-201ENSMUST00000180334 119 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC15.71■□□□□ 0.11
Col18a1P39061 AC134601.2-201ENSMUST00000221071 130 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 AC164099.1-201ENSMUST00000227780 333 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col18a1P39061 Gm24089-201ENSMUST00000093696 109 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col18a1P39061 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col18a1P39061 Gm44190-201ENSMUST00000205083 1401 ntBASIC15.71■□□□□ 0.11
Col18a1P39061 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col18a1P39061 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col18a1P39061 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col18a1P39061 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col18a1P39061 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Col18a1P39061 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC15.7■□□□□ 0.1
Col18a1P39061 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col18a1P39061 Gm23439-201ENSMUST00000104292 132 ntBASIC15.7■□□□□ 0.1
Col18a1P39061 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Gm11960-201ENSMUST00000122068 925 ntBASIC15.7■□□□□ 0.1
Col18a1P39061 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC15.7■□□□□ 0.1
Col18a1P39061 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC15.7■□□□□ 0.1
Col18a1P39061 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Gm5178-201ENSMUST00000219380 898 ntBASIC15.7■□□□□ 0.1
Col18a1P39061 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.7■□□□□ 0.1
Col18a1P39061 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col18a1P39061 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col18a1P39061 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC15.7■□□□□ 0.1
Col18a1P39061 Gm20493-201ENSMUST00000173706 213 ntBASIC15.7■□□□□ 0.1
Col18a1P39061 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Col18a1P39061 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col18a1P39061 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col18a1P39061 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col18a1P39061 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col18a1P39061 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col18a1P39061 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC15.69■□□□□ 0.1
Col18a1P39061 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC15.69■□□□□ 0.1
Col18a1P39061 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.69■□□□□ 0.1
Col18a1P39061 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Col18a1P39061 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col18a1P39061 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC15.69■□□□□ 0.1
Col18a1P39061 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Col18a1P39061 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col18a1P39061 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms