Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Upk2P38575 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Upk2P38575 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Gm14644-201ENSMUST00000116671 647 ntBASIC10.66□□□□□ -0.7
Upk2P38575 Gm14726-201ENSMUST00000120623 896 ntBASIC10.66□□□□□ -0.7
Upk2P38575 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.66□□□□□ -0.7
Upk2P38575 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.66□□□□□ -0.7
Upk2P38575 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.66□□□□□ -0.7
Upk2P38575 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.66□□□□□ -0.7
Upk2P38575 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Gm21769-201ENSMUST00000211922 111 ntBASIC10.66□□□□□ -0.7
Upk2P38575 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.66□□□□□ -0.7
Upk2P38575 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.66□□□□□ -0.7
Upk2P38575 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.66□□□□□ -0.7
Upk2P38575 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Upk2P38575 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk2P38575 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Upk2P38575 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.65□□□□□ -0.7
Upk2P38575 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Upk2P38575 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.65□□□□□ -0.7
Upk2P38575 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.65□□□□□ -0.7
Upk2P38575 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Upk2P38575 Gm12015-201ENSMUST00000117065 843 ntBASIC10.65□□□□□ -0.7
Upk2P38575 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Gm2991-201ENSMUST00000173338 480 ntBASIC10.65□□□□□ -0.7
Upk2P38575 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Upk2P38575 Gm5706-201ENSMUST00000181525 993 ntBASIC10.65□□□□□ -0.7
Upk2P38575 Gm3096-201ENSMUST00000185770 364 ntBASIC10.65□□□□□ -0.7
Upk2P38575 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.65□□□□□ -0.7
Upk2P38575 Gm31256-201ENSMUST00000194705 506 ntBASIC10.65□□□□□ -0.7
Upk2P38575 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.65□□□□□ -0.7
Upk2P38575 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.65□□□□□ -0.7
Upk2P38575 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Upk2P38575 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.65□□□□□ -0.7
Upk2P38575 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk2P38575 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms