Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.22□□□□□ -0.45
RxrbP28704 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RxrbP28704 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.22□□□□□ -0.45
RxrbP28704 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.22□□□□□ -0.45
RxrbP28704 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RxrbP28704 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Gm18304-201ENSMUST00000189162 546 ntBASIC12.22□□□□□ -0.45
RxrbP28704 Gm9136-201ENSMUST00000193368 454 ntBASIC12.22□□□□□ -0.45
RxrbP28704 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.22□□□□□ -0.45
RxrbP28704 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
RxrbP28704 Gm32025-201ENSMUST00000217960 307 ntBASIC12.22□□□□□ -0.45
RxrbP28704 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.22□□□□□ -0.45
RxrbP28704 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RxrbP28704 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.22□□□□□ -0.45
RxrbP28704 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RxrbP28704 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RxrbP28704 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.22□□□□□ -0.45
RxrbP28704 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.21□□□□□ -0.45
RxrbP28704 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.21□□□□□ -0.45
RxrbP28704 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Gm13369-201ENSMUST00000119442 987 ntBASIC12.21□□□□□ -0.45
RxrbP28704 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RxrbP28704 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.21□□□□□ -0.45
RxrbP28704 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.21□□□□□ -0.45
RxrbP28704 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RxrbP28704 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.21□□□□□ -0.45
RxrbP28704 Gm4271-201ENSMUST00000174444 973 ntBASIC12.21□□□□□ -0.45
RxrbP28704 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Gm8652-201ENSMUST00000181363 964 ntBASIC12.21□□□□□ -0.45
RxrbP28704 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RxrbP28704 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RxrbP28704 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RxrbP28704 Gm10146-201ENSMUST00000072739 309 ntBASIC12.21□□□□□ -0.45
RxrbP28704 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
RxrbP28704 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RxrbP28704 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RxrbP28704 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.21□□□□□ -0.46
RxrbP28704 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.21□□□□□ -0.46
RxrbP28704 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RxrbP28704 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RxrbP28704 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
RxrbP28704 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.21□□□□□ -0.46
RxrbP28704 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.21□□□□□ -0.46
RxrbP28704 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RxrbP28704 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RxrbP28704 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RxrbP28704 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.2□□□□□ -0.46
RxrbP28704 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms