Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm43184-201ENSMUST00000197247 542 ntBASIC12.15□□□□□ -0.46
Nckap1P28660 Gm44100-201ENSMUST00000204329 436 ntBASIC12.15□□□□□ -0.46
Nckap1P28660 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.15□□□□□ -0.46
Nckap1P28660 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.15□□□□□ -0.46
Nckap1P28660 Gm270-201ENSMUST00000223010 976 ntBASIC12.15□□□□□ -0.46
Nckap1P28660 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.15□□□□□ -0.46
Nckap1P28660 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nckap1P28660 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.15□□□□□ -0.46
Nckap1P28660 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Nckap1P28660 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nckap1P28660 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nckap1P28660 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nckap1P28660 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nckap1P28660 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nckap1P28660 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nckap1P28660 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.14□□□□□ -0.47
Nckap1P28660 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.14□□□□□ -0.47
Nckap1P28660 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Nckap1P28660 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nckap1P28660 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nckap1P28660 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12616-201ENSMUST00000118594 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12501-201ENSMUST00000119163 529 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm22334-201ENSMUST00000158070 133 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Nckap1P28660 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12624-201ENSMUST00000177615 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12621-201ENSMUST00000177760 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12615-201ENSMUST00000177970 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12622-201ENSMUST00000177975 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12627-201ENSMUST00000178412 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12625-201ENSMUST00000179122 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12614-201ENSMUST00000179586 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Gm12613-201ENSMUST00000180323 382 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.14□□□□□ -0.47
Nckap1P28660 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Gm5455-201ENSMUST00000058710 715 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nckap1P28660 Gm21811-201ENSMUST00000096485 930 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.14□□□□□ -0.47
Nckap1P28660 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nckap1P28660 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.14□□□□□ -0.47
Nckap1P28660 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Nckap1P28660 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.13□□□□□ -0.47
Nckap1P28660 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Nckap1P28660 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.13□□□□□ -0.47
Nckap1P28660 Gm25881-201ENSMUST00000157783 103 ntBASIC12.13□□□□□ -0.47
Nckap1P28660 Gm18711-201ENSMUST00000199341 750 ntBASIC12.13□□□□□ -0.47
Nckap1P28660 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.13□□□□□ -0.47
Nckap1P28660 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Nckap1P28660 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.13□□□□□ -0.47
Nckap1P28660 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Gm26448-201ENSMUST00000082446 203 ntBASIC12.13□□□□□ -0.47
Nckap1P28660 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms