Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pde6aP27664 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.09□□□□□ -0.15
Pde6aP27664 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.09□□□□□ -0.15
Pde6aP27664 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pde6aP27664 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.08□□□□□ -0.15
Pde6aP27664 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pde6aP27664 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.08□□□□□ -0.15
Pde6aP27664 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.08□□□□□ -0.15
Pde6aP27664 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pde6aP27664 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.08□□□□□ -0.16
Pde6aP27664 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.08□□□□□ -0.16
Pde6aP27664 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Pde6aP27664 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pde6aP27664 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Gm5616-201ENSMUST00000165252 384 ntBASIC14.08□□□□□ -0.16
Pde6aP27664 Gm8741-201ENSMUST00000174736 384 ntBASIC14.08□□□□□ -0.16
Pde6aP27664 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.08□□□□□ -0.16
Pde6aP27664 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.08□□□□□ -0.16
Pde6aP27664 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.08□□□□□ -0.16
Pde6aP27664 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pde6aP27664 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.08□□□□□ -0.16
Pde6aP27664 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pde6aP27664 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pde6aP27664 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.08□□□□□ -0.16
Pde6aP27664 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6aP27664 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Pde6aP27664 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.07□□□□□ -0.16
Pde6aP27664 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.07□□□□□ -0.16
Pde6aP27664 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Pde6aP27664 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.07□□□□□ -0.16
Pde6aP27664 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pde6aP27664 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.07□□□□□ -0.16
Pde6aP27664 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.07□□□□□ -0.16
Pde6aP27664 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Gm9136-201ENSMUST00000193368 454 ntBASIC14.07□□□□□ -0.16
Pde6aP27664 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.07□□□□□ -0.16
Pde6aP27664 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.07□□□□□ -0.16
Pde6aP27664 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pde6aP27664 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pde6aP27664 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.07□□□□□ -0.16
Pde6aP27664 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.07□□□□□ -0.16
Pde6aP27664 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Pde6aP27664 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pde6aP27664 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6aP27664 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.07□□□□□ -0.16
Pde6aP27664 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.06□□□□□ -0.16
Pde6aP27664 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pde6aP27664 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Pde6aP27664 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms