Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.29□□□□□ -0.6
Cd40lgP27548 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm16296-201ENSMUST00000159905 325 ntBASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm20482-202ENSMUST00000174729 825 ntBASIC11.29□□□□□ -0.6
Cd40lgP27548 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm7783-201ENSMUST00000204795 781 ntBASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm45865-201ENSMUST00000211815 945 ntBASIC11.29□□□□□ -0.6
Cd40lgP27548 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.29□□□□□ -0.6
Cd40lgP27548 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.29□□□□□ -0.6
Cd40lgP27548 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cd40lgP27548 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cd40lgP27548 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Cd40lgP27548 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cd40lgP27548 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cd40lgP27548 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm21769-201ENSMUST00000211922 111 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm30285-201ENSMUST00000214614 422 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cd40lgP27548 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd40lgP27548 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.28□□□□□ -0.6
Cd40lgP27548 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cd40lgP27548 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Cd40lgP27548 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd40lgP27548 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd40lgP27548 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cd40lgP27548 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cd40lgP27548 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Cd40lgP27548 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd40lgP27548 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm13350-201ENSMUST00000120519 479 ntBASIC11.27□□□□□ -0.61
Cd40lgP27548 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms