Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clk1P22518 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.44□□□□□ -0.58
Clk1P22518 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clk1P22518 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Gm5187-201ENSMUST00000117317 991 ntBASIC11.44□□□□□ -0.58
Clk1P22518 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.44□□□□□ -0.58
Clk1P22518 Gm11964-201ENSMUST00000120982 444 ntBASIC11.44□□□□□ -0.58
Clk1P22518 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.44□□□□□ -0.58
Clk1P22518 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.44□□□□□ -0.58
Clk1P22518 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.44□□□□□ -0.58
Clk1P22518 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.44□□□□□ -0.58
Clk1P22518 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.44□□□□□ -0.58
Clk1P22518 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.44□□□□□ -0.58
Clk1P22518 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.44□□□□□ -0.58
Clk1P22518 Gm18164-201ENSMUST00000213769 927 ntBASIC11.44□□□□□ -0.58
Clk1P22518 Gm18166-201ENSMUST00000215557 927 ntBASIC11.44□□□□□ -0.58
Clk1P22518 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.44□□□□□ -0.58
Clk1P22518 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.44□□□□□ -0.58
Clk1P22518 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.44□□□□□ -0.58
Clk1P22518 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clk1P22518 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.44□□□□□ -0.58
Clk1P22518 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clk1P22518 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.43□□□□□ -0.58
Clk1P22518 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Gm10434-201ENSMUST00000101158 471 ntBASIC11.43□□□□□ -0.58
Clk1P22518 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms