Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc8P09025 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hoxc8P09025 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm12036-201ENSMUST00000120008 530 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm8492-201ENSMUST00000182375 987 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm8342-201ENSMUST00000209839 757 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.88□□□□□ -0.35
Hoxc8P09025 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm5451-201ENSMUST00000080545 579 ntBASIC12.88□□□□□ -0.35
Hoxc8P09025 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hoxc8P09025 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hoxc8P09025 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc8P09025 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm29155-201ENSMUST00000185910 269 ntBASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm43852-201ENSMUST00000202098 917 ntBASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm2875-201ENSMUST00000211333 360 ntBASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxc8P09025 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxc8P09025 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.87□□□□□ -0.35
Hoxc8P09025 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.87□□□□□ -0.35
Hoxc8P09025 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxc8P09025 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.87□□□□□ -0.35
Hoxc8P09025 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.87□□□□□ -0.35
Hoxc8P09025 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc8P09025 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.86□□□□□ -0.35
Hoxc8P09025 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Gm23272-201ENSMUST00000104053 129 ntBASIC12.86□□□□□ -0.35
Hoxc8P09025 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Gm25072-201ENSMUST00000175233 235 ntBASIC12.86□□□□□ -0.35
Hoxc8P09025 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.86□□□□□ -0.35
Hoxc8P09025 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxc8P09025 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms