Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.36□□□□□ -0.11
Col3a1P08121 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col3a1P08121 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col3a1P08121 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.36□□□□□ -0.11
Col3a1P08121 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Col3a1P08121 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.36□□□□□ -0.11
Col3a1P08121 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.36□□□□□ -0.11
Col3a1P08121 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.36□□□□□ -0.11
Col3a1P08121 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.36□□□□□ -0.11
Col3a1P08121 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.36□□□□□ -0.11
Col3a1P08121 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col3a1P08121 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.36□□□□□ -0.11
Col3a1P08121 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.36□□□□□ -0.11
Col3a1P08121 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col3a1P08121 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col3a1P08121 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Col3a1P08121 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.35□□□□□ -0.11
Col3a1P08121 Gm12899-201ENSMUST00000120565 551 ntBASIC14.35□□□□□ -0.11
Col3a1P08121 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.35□□□□□ -0.11
Col3a1P08121 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.35□□□□□ -0.11
Col3a1P08121 Mir8093-201ENSMUST00000185043 137 ntBASIC14.35□□□□□ -0.11
Col3a1P08121 Gm38210-201ENSMUST00000191944 809 ntBASIC14.35□□□□□ -0.11
Col3a1P08121 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.35□□□□□ -0.11
Col3a1P08121 Gm2517-201ENSMUST00000215651 348 ntBASIC14.35□□□□□ -0.11
Col3a1P08121 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.35□□□□□ -0.11
Col3a1P08121 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col3a1P08121 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.35□□□□□ -0.11
Col3a1P08121 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col3a1P08121 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.35□□□□□ -0.11
Col3a1P08121 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col3a1P08121 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col3a1P08121 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.34□□□□□ -0.11
Col3a1P08121 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.34□□□□□ -0.11
Col3a1P08121 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.34□□□□□ -0.11
Col3a1P08121 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.34□□□□□ -0.11
Col3a1P08121 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col3a1P08121 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.34□□□□□ -0.11
Col3a1P08121 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.34□□□□□ -0.11
Col3a1P08121 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col3a1P08121 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col3a1P08121 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms