Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.59□□□□□ -0.39
PrnpP04925 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PrnpP04925 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
PrnpP04925 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.58□□□□□ -0.4
PrnpP04925 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PrnpP04925 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.58□□□□□ -0.4
PrnpP04925 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Gm12579-201ENSMUST00000118040 783 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm8731-201ENSMUST00000118088 412 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm11451-201ENSMUST00000118946 630 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm12516-201ENSMUST00000120819 385 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm16397-201ENSMUST00000122201 494 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.58□□□□□ -0.4
PrnpP04925 Gm6485-201ENSMUST00000160676 439 ntBASIC12.58□□□□□ -0.4
PrnpP04925 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm4310-201ENSMUST00000177847 889 ntBASIC12.58□□□□□ -0.4
PrnpP04925 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.58□□□□□ -0.4
PrnpP04925 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm43186-201ENSMUST00000198130 824 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.58□□□□□ -0.4
PrnpP04925 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PrnpP04925 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.58□□□□□ -0.4
PrnpP04925 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.58□□□□□ -0.4
PrnpP04925 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
PrnpP04925 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.58□□□□□ -0.4
PrnpP04925 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.58□□□□□ -0.4
PrnpP04925 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
PrnpP04925 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrnpP04925 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
PrnpP04925 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.57□□□□□ -0.4
PrnpP04925 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.57□□□□□ -0.4
PrnpP04925 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.57□□□□□ -0.4
PrnpP04925 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PrnpP04925 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.57□□□□□ -0.4
PrnpP04925 Gm11949-201ENSMUST00000117640 372 ntBASIC12.57□□□□□ -0.4
PrnpP04925 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.57□□□□□ -0.4
PrnpP04925 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.57□□□□□ -0.4
PrnpP04925 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.57□□□□□ -0.4
PrnpP04925 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Gm38210-201ENSMUST00000191944 809 ntBASIC12.57□□□□□ -0.4
PrnpP04925 Gm9645-201ENSMUST00000197131 792 ntBASIC12.57□□□□□ -0.4
PrnpP04925 Gm44980-201ENSMUST00000205826 314 ntBASIC12.57□□□□□ -0.4
PrnpP04925 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.57□□□□□ -0.4
PrnpP04925 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.57□□□□□ -0.4
PrnpP04925 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.57□□□□□ -0.4
PrnpP04925 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.57□□□□□ -0.4
PrnpP04925 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.57□□□□□ -0.4
PrnpP04925 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrnpP04925 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PrnpP04925 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms