Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
P04224 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
P04224 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.68□□□□□ -0.7
P04224 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
P04224 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
P04224 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
P04224 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
P04224 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
P04224 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04224 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04224 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.68□□□□□ -0.7
P04224 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.68□□□□□ -0.7
P04224 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.68□□□□□ -0.7
P04224 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.68□□□□□ -0.7
P04224 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.68□□□□□ -0.7
P04224 Gm28631-201ENSMUST00000190740 334 ntBASIC10.68□□□□□ -0.7
P04224 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.68□□□□□ -0.7
P04224 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04224 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.68□□□□□ -0.7
P04224 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.68□□□□□ -0.7
P04224 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.68□□□□□ -0.7
P04224 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P04224 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04224 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.68□□□□□ -0.7
P04224 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04224 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.67□□□□□ -0.7
P04224 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.67□□□□□ -0.7
P04224 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Gm6152-201ENSMUST00000151704 340 ntBASIC10.67□□□□□ -0.7
P04224 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.67□□□□□ -0.7
P04224 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.67□□□□□ -0.7
P04224 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Gm35960-201ENSMUST00000202712 767 ntBASIC10.67□□□□□ -0.7
P04224 Gm20949-201ENSMUST00000206478 952 ntBASIC10.67□□□□□ -0.7
P04224 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms