Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.66□□□□□ -0.06
Col4a1P02463 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.66□□□□□ -0.06
Col4a1P02463 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.66□□□□□ -0.06
Col4a1P02463 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.66□□□□□ -0.06
Col4a1P02463 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Gm8723-201ENSMUST00000166076 820 ntBASIC14.66□□□□□ -0.06
Col4a1P02463 Gm8701-201ENSMUST00000169259 874 ntBASIC14.66□□□□□ -0.06
Col4a1P02463 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.66□□□□□ -0.06
Col4a1P02463 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Col4a1P02463 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.66□□□□□ -0.06
Col4a1P02463 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.66□□□□□ -0.06
Col4a1P02463 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.66□□□□□ -0.06
Col4a1P02463 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.66□□□□□ -0.06
Col4a1P02463 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.66□□□□□ -0.06
Col4a1P02463 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.65□□□□□ -0.06
Col4a1P02463 Gm15615-201ENSMUST00000118876 198 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Gm12036-201ENSMUST00000120008 530 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.65□□□□□ -0.06
Col4a1P02463 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.65□□□□□ -0.06
Col4a1P02463 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Gm25063-201ENSMUST00000104666 94 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Gm9089-201ENSMUST00000122027 526 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.65□□□□□ -0.06
Col4a1P02463 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.65□□□□□ -0.06
Col4a1P02463 Gm6114-201ENSMUST00000182472 968 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Gm37826-201ENSMUST00000195329 322 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Gm6108-201ENSMUST00000208365 367 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.65□□□□□ -0.06
Col4a1P02463 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.65□□□□□ -0.06
Col4a1P02463 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col4a1P02463 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Col4a1P02463 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.64□□□□□ -0.07
Col4a1P02463 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Gm25880-201ENSMUST00000104331 132 ntBASIC14.64□□□□□ -0.07
Col4a1P02463 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.64□□□□□ -0.07
Col4a1P02463 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.64□□□□□ -0.07
Col4a1P02463 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col4a1P02463 Gm24398-201ENSMUST00000157870 109 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms