Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.17□□□□□ -0.3
Vti1aO89116 Gm45118-201ENSMUST00000208928 825 ntBASIC13.17□□□□□ -0.3
Vti1aO89116 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.17□□□□□ -0.3
Vti1aO89116 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.17□□□□□ -0.3
Vti1aO89116 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vti1aO89116 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vti1aO89116 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Vti1aO89116 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12616-201ENSMUST00000118594 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vti1aO89116 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.16□□□□□ -0.3
Vti1aO89116 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12624-201ENSMUST00000177615 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12621-201ENSMUST00000177760 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12615-201ENSMUST00000177970 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12622-201ENSMUST00000177975 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12627-201ENSMUST00000178412 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12625-201ENSMUST00000179122 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12614-201ENSMUST00000179586 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Gm12613-201ENSMUST00000180323 382 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.16□□□□□ -0.3
Vti1aO89116 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.16□□□□□ -0.3
Vti1aO89116 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.16□□□□□ -0.3
Vti1aO89116 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Vti1aO89116 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.16□□□□□ -0.3
Vti1aO89116 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vti1aO89116 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vti1aO89116 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.15□□□□□ -0.3
Vti1aO89116 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.15□□□□□ -0.3
Vti1aO89116 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Mir1943-201ENSMUST00000158276 73 ntBASIC13.15□□□□□ -0.3
Vti1aO89116 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Vti1aO89116 Gm28071-201ENSMUST00000190355 478 ntBASIC13.15□□□□□ -0.3
Vti1aO89116 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.15□□□□□ -0.3
Vti1aO89116 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Vti1aO89116 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.15□□□□□ -0.3
Vti1aO89116 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vti1aO89116 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms