Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.23□□□□□ -0.61
Cops4O88544 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.23□□□□□ -0.61
Cops4O88544 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.23□□□□□ -0.61
Cops4O88544 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.23□□□□□ -0.61
Cops4O88544 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cops4O88544 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
Cops4O88544 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.23□□□□□ -0.61
Cops4O88544 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Cops4O88544 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.22□□□□□ -0.61
Cops4O88544 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cops4O88544 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cops4O88544 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.22□□□□□ -0.61
Cops4O88544 Gm10156-201ENSMUST00000122364 462 ntBASIC11.22□□□□□ -0.61
Cops4O88544 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.22□□□□□ -0.61
Cops4O88544 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Gm26185-201ENSMUST00000157692 266 ntBASIC11.22□□□□□ -0.61
Cops4O88544 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cops4O88544 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.22□□□□□ -0.61
Cops4O88544 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.22□□□□□ -0.61
Cops4O88544 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.22□□□□□ -0.61
Cops4O88544 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cops4O88544 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.22□□□□□ -0.61
Cops4O88544 Gm17794-201ENSMUST00000220252 955 ntBASIC11.22□□□□□ -0.61
Cops4O88544 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.22□□□□□ -0.61
Cops4O88544 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Cops4O88544 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.22□□□□□ -0.61
Cops4O88544 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cops4O88544 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Cops4O88544 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.22□□□□□ -0.61
Cops4O88544 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.21□□□□□ -0.61
Cops4O88544 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Cops4O88544 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.21□□□□□ -0.61
Cops4O88544 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.21□□□□□ -0.61
Cops4O88544 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.21□□□□□ -0.61
Cops4O88544 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.21□□□□□ -0.61
Cops4O88544 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Gm16296-201ENSMUST00000159905 325 ntBASIC11.21□□□□□ -0.61
Cops4O88544 Gm8810-201ENSMUST00000172895 754 ntBASIC11.21□□□□□ -0.61
Cops4O88544 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Cops4O88544 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.21□□□□□ -0.61
Cops4O88544 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.21□□□□□ -0.61
Cops4O88544 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cops4O88544 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.21□□□□□ -0.62
Cops4O88544 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms