Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ldb2O55203 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.09□□□□□ -0.47
Ldb2O55203 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.09□□□□□ -0.47
Ldb2O55203 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Ldb2O55203 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ldb2O55203 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ldb2O55203 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Ldb2O55203 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ldb2O55203 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ldb2O55203 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ldb2O55203 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ldb2O55203 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ldb2O55203 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm7722-201ENSMUST00000120646 741 ntBASIC12.08□□□□□ -0.48
Ldb2O55203 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.08□□□□□ -0.48
Ldb2O55203 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm5706-201ENSMUST00000181525 993 ntBASIC12.08□□□□□ -0.48
Ldb2O55203 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm19187-201ENSMUST00000206781 892 ntBASIC12.08□□□□□ -0.48
Ldb2O55203 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.08□□□□□ -0.48
Ldb2O55203 Gzmn-202ENSMUST00000225535 989 ntBASIC12.08□□□□□ -0.48
Ldb2O55203 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ldb2O55203 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ldb2O55203 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ldb2O55203 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Gm11989-201ENSMUST00000117240 672 ntBASIC12.07□□□□□ -0.48
Ldb2O55203 Gm11362-201ENSMUST00000118838 850 ntBASIC12.07□□□□□ -0.48
Ldb2O55203 Gm12036-201ENSMUST00000120008 530 ntBASIC12.07□□□□□ -0.48
Ldb2O55203 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.07□□□□□ -0.48
Ldb2O55203 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.07□□□□□ -0.48
Ldb2O55203 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.07□□□□□ -0.48
Ldb2O55203 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.07□□□□□ -0.48
Ldb2O55203 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.07□□□□□ -0.48
Ldb2O55203 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms