Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm12795-201ENSMUST00000117594 539 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm15610-201ENSMUST00000120584 195 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm44980-201ENSMUST00000205826 314 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm11451-201ENSMUST00000118946 630 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm16071-201ENSMUST00000119589 793 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 Mir1901-201ENSMUST00000122616 78 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm17826-201ENSMUST00000189720 798 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm2553-201ENSMUST00000215986 605 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.37□□□□□ -0.27
Trdmt1O55055 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trdmt1O55055 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trdmt1O55055 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trdmt1O55055 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms