Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.28□□□□□ -0.76
Cxcl13O55038 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm11509-201ENSMUST00000117358 325 ntBASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.28□□□□□ -0.76
Cxcl13O55038 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm5705-201ENSMUST00000066241 711 ntBASIC10.28□□□□□ -0.76
Cxcl13O55038 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl13O55038 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl13O55038 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
Cxcl13O55038 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Cxcl13O55038 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl13O55038 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl13O55038 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl13O55038 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.27□□□□□ -0.76
Cxcl13O55038 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl13O55038 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm23251-201ENSMUST00000103773 110 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm24891-201ENSMUST00000104391 136 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm12857-201ENSMUST00000117678 592 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm5419-201ENSMUST00000119301 527 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm23085-201ENSMUST00000157849 293 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm9555-201ENSMUST00000200908 583 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm1821-202ENSMUST00000227415 750 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cxcl13O55038 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.27□□□□□ -0.77
Cxcl13O55038 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.27□□□□□ -0.77
Cxcl13O55038 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cxcl13O55038 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms