Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Copb2O55029 Gm13611-201ENSMUST00000118269 318 ntBASIC13.98□□□□□ -0.17
Copb2O55029 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.98□□□□□ -0.17
Copb2O55029 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.98□□□□□ -0.17
Copb2O55029 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Copb2O55029 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Mir7677-201ENSMUST00000184226 67 ntBASIC13.98□□□□□ -0.17
Copb2O55029 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.98□□□□□ -0.17
Copb2O55029 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Copb2O55029 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Copb2O55029 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.98□□□□□ -0.17
Copb2O55029 Gm270-201ENSMUST00000223010 976 ntBASIC13.98□□□□□ -0.17
Copb2O55029 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Copb2O55029 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Copb2O55029 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.98□□□□□ -0.17
Copb2O55029 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Copb2O55029 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Copb2O55029 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.97□□□□□ -0.17
Copb2O55029 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Copb2O55029 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.97□□□□□ -0.17
Copb2O55029 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.97□□□□□ -0.17
Copb2O55029 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Copb2O55029 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.97□□□□□ -0.17
Copb2O55029 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Copb2O55029 Gm23596-201ENSMUST00000104304 132 ntBASIC13.97□□□□□ -0.17
Copb2O55029 Gm14058-201ENSMUST00000116082 735 ntBASIC13.97□□□□□ -0.17
Copb2O55029 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.97□□□□□ -0.17
Copb2O55029 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Gm25881-201ENSMUST00000157783 103 ntBASIC13.97□□□□□ -0.17
Copb2O55029 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.97□□□□□ -0.17
Copb2O55029 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.97□□□□□ -0.17
Copb2O55029 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.97□□□□□ -0.17
Copb2O55029 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Gm18711-201ENSMUST00000199341 750 ntBASIC13.97□□□□□ -0.17
Copb2O55029 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.97□□□□□ -0.17
Copb2O55029 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Copb2O55029 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.97□□□□□ -0.17
Copb2O55029 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Copb2O55029 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Copb2O55029 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.97□□□□□ -0.17
Copb2O55029 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.97□□□□□ -0.17
Copb2O55029 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Copb2O55029 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.96□□□□□ -0.17
Copb2O55029 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.96□□□□□ -0.17
Copb2O55029 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Copb2O55029 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Copb2O55029 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Copb2O55029 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.96□□□□□ -0.17
Copb2O55029 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Gm23912-201ENSMUST00000104687 87 ntBASIC13.96□□□□□ -0.17
Copb2O55029 Gm13035-201ENSMUST00000117496 342 ntBASIC13.96□□□□□ -0.17
Copb2O55029 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.96□□□□□ -0.17
Copb2O55029 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.96□□□□□ -0.17
Copb2O55029 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.96□□□□□ -0.17
Copb2O55029 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Copb2O55029 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms