Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.31□□□□□ -0.44
ChkaO54804 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.31□□□□□ -0.44
ChkaO54804 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.31□□□□□ -0.44
ChkaO54804 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ChkaO54804 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ChkaO54804 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ChkaO54804 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ChkaO54804 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ChkaO54804 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.3□□□□□ -0.44
ChkaO54804 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ChkaO54804 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ChkaO54804 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.3□□□□□ -0.44
ChkaO54804 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ChkaO54804 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ChkaO54804 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.29□□□□□ -0.44
ChkaO54804 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
ChkaO54804 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ChkaO54804 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ChkaO54804 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.29□□□□□ -0.44
ChkaO54804 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ChkaO54804 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.29□□□□□ -0.44
ChkaO54804 Gm6023-201ENSMUST00000118217 606 ntBASIC12.29□□□□□ -0.44
ChkaO54804 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.29□□□□□ -0.44
ChkaO54804 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.29□□□□□ -0.44
ChkaO54804 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.29□□□□□ -0.44
ChkaO54804 Snora78-201ENSMUST00000158630 128 ntBASIC12.29□□□□□ -0.44
ChkaO54804 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.29□□□□□ -0.44
ChkaO54804 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.29□□□□□ -0.44
ChkaO54804 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.29□□□□□ -0.44
ChkaO54804 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.29□□□□□ -0.44
ChkaO54804 Gm19309-201ENSMUST00000218295 205 ntBASIC12.29□□□□□ -0.44
ChkaO54804 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ChkaO54804 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ChkaO54804 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.29□□□□□ -0.44
ChkaO54804 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ChkaO54804 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ChkaO54804 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ChkaO54804 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.28□□□□□ -0.44
ChkaO54804 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.28□□□□□ -0.44
ChkaO54804 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.28□□□□□ -0.44
ChkaO54804 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms