Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Limk2O54785 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Gm14644-201ENSMUST00000116671 647 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Gm13996-201ENSMUST00000118456 430 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Rprl1-201ENSMUST00000158050 327 ntBASIC12.36□□□□□ -0.43
Limk2O54785 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.36□□□□□ -0.43
Limk2O54785 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.36□□□□□ -0.43
Limk2O54785 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Limk2O54785 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Limk2O54785 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.35□□□□□ -0.43
Limk2O54785 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Limk2O54785 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.35□□□□□ -0.43
Limk2O54785 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Limk2O54785 Gm5523-201ENSMUST00000180415 997 ntBASIC12.35□□□□□ -0.43
Limk2O54785 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Gm29787-201ENSMUST00000222129 849 ntBASIC12.35□□□□□ -0.43
Limk2O54785 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.35□□□□□ -0.43
Limk2O54785 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.35□□□□□ -0.43
Limk2O54785 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.35□□□□□ -0.43
Limk2O54785 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Limk2O54785 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Limk2O54785 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Limk2O54785 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms