Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Polr1aO35134 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC18.38■□□□□ 0.53
Polr1aO35134 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Polr1aO35134 Gm12791-201ENSMUST00000120788 655 ntBASIC18.38■□□□□ 0.53
Polr1aO35134 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC18.38■□□□□ 0.53
Polr1aO35134 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC18.38■□□□□ 0.53
Polr1aO35134 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC18.38■□□□□ 0.53
Polr1aO35134 Gm25201-201ENSMUST00000083093 170 ntBASIC18.38■□□□□ 0.53
Polr1aO35134 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Gm7002-201ENSMUST00000221386 2165 ntBASIC18.38■□□□□ 0.53
Polr1aO35134 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Polr1aO35134 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC18.38■□□□□ 0.53
Polr1aO35134 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Gm9415-201ENSMUST00000200462 1321 ntBASIC18.38■□□□□ 0.53
Polr1aO35134 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.38■□□□□ 0.53
Polr1aO35134 Gm8522-201ENSMUST00000118416 1929 ntBASIC18.38■□□□□ 0.53
Polr1aO35134 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Polr1aO35134 AC158636.1-201ENSMUST00000220118 1393 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm18776-201ENSMUST00000188833 654 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm45484-201ENSMUST00000210310 1141 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 CT030653.1-201ENSMUST00000224382 1279 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Polr1aO35134 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Polr1aO35134 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC18.37■□□□□ 0.53
Polr1aO35134 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Polr1aO35134 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm11980-201ENSMUST00000121445 986 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 Gm25492-201ENSMUST00000157383 129 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm37826-201ENSMUST00000195329 322 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm18514-201ENSMUST00000218980 436 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Polr1aO35134 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Gm37861-201ENSMUST00000193534 2869 ntBASIC18.37■□□□□ 0.53
Polr1aO35134 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr1aO35134 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC18.36■□□□□ 0.53
Polr1aO35134 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC18.36■□□□□ 0.53
Polr1aO35134 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC18.36■□□□□ 0.53
Polr1aO35134 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC18.36■□□□□ 0.53
Polr1aO35134 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Polr1aO35134 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC18.36■□□□□ 0.53
Polr1aO35134 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Gm43334-201ENSMUST00000197740 1318 ntBASIC18.36■□□□□ 0.53
Polr1aO35134 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Polr1aO35134 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Polr1aO35134 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Polr1aO35134 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC18.35■□□□□ 0.53
Polr1aO35134 Gm12969-201ENSMUST00000120199 1004 ntBASIC18.35■□□□□ 0.53
Polr1aO35134 Gm15549-201ENSMUST00000121595 622 ntBASIC18.35■□□□□ 0.53
Polr1aO35134 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC18.35■□□□□ 0.53
Polr1aO35134 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms