Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm15711-201ENSMUST00000118889 535 ntBASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Gm12036-201ENSMUST00000120008 530 ntBASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 AY036118-201ENSMUST00000200021 923 ntBASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syngap1F6SEU4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Syngap1F6SEU4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syngap1F6SEU4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Syngap1F6SEU4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syngap1F6SEU4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syngap1F6SEU4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.7□□□□□ -0.22
Syngap1F6SEU4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.7□□□□□ -0.22
Syngap1F6SEU4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gm9996-201ENSMUST00000070359 913 ntBASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Syngap1F6SEU4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm12314-201ENSMUST00000118104 538 ntBASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm11246-201ENSMUST00000120880 345 ntBASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.69□□□□□ -0.22
Syngap1F6SEU4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm27627-201ENSMUST00000183644 150 ntBASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Ginm1-202ENSMUST00000065124 300 ntBASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms