Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm27844-201ENSMUST00000183613 62 ntBASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Gm37986-201ENSMUST00000193285 383 ntBASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Gm19994-201ENSMUST00000217086 586 ntBASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Gm18730-201ENSMUST00000218038 343 ntBASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh17E9PXF0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm12266-201ENSMUST00000120311 962 ntBASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm22902-201ENSMUST00000158488 302 ntBASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh17E9PXF0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm29615-201ENSMUST00000185371 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm28224-201ENSMUST00000186078 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm29001-201ENSMUST00000186177 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm28292-201ENSMUST00000186593 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm28101-201ENSMUST00000187608 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm29076-201ENSMUST00000187689 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm28302-201ENSMUST00000187931 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm28646-201ENSMUST00000188220 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm28205-201ENSMUST00000189177 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm29032-201ENSMUST00000189797 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm28695-201ENSMUST00000190300 697 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm37448-201ENSMUST00000192795 697 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms