Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.91□□□□□ -0.66
Shank1D3YZU1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.91□□□□□ -0.66
Shank1D3YZU1 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.91□□□□□ -0.66
Shank1D3YZU1 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.91□□□□□ -0.66
Shank1D3YZU1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm13263-201ENSMUST00000121271 838 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm43184-201ENSMUST00000197247 542 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm9139-201ENSMUST00000218817 700 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm3619-201ENSMUST00000219947 775 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm21092-201ENSMUST00000178995 955 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Gm28686-201ENSMUST00000187404 609 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.9□□□□□ -0.66
Shank1D3YZU1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Shank1D3YZU1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.9□□□□□ -0.67
Shank1D3YZU1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms