Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm5687-201ENSMUST00000118252 640 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm15920-201ENSMUST00000118998 402 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mir686-201ENSMUST00000102174 109 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm13813-201ENSMUST00000120998 787 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm15321-201ENSMUST00000121290 288 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm18307-201ENSMUST00000206864 949 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Syt7-204ENSMUST00000223586 1344 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms