Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm5186-201ENSMUST00000218781 920 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm14350-201ENSMUST00000116642 640 ntBASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm2231-201ENSMUST00000125661 612 ntBASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav6n-6A0A075B6B2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav6n-6A0A075B6B2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms