Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Gm8738-201ENSMUST00000172606 329 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Gm7063-201ENSMUST00000186840 981 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Daam2-202ENSMUST00000224595 1926 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.23□□□□□ -0.77
Trav5-4A0A075B652 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm11591-201ENSMUST00000120063 702 ntBASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm11597-201ENSMUST00000121423 964 ntBASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm6266-201ENSMUST00000203844 806 ntBASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm6007-201ENSMUST00000208170 823 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms