Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Gm5369-201ENSMUST00000217499 588 ntBASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Smarcb1Q9Z0H3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smarcb1Q9Z0H3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm8566-201ENSMUST00000120174 465 ntBASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm18893-201ENSMUST00000198416 943 ntBASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcb1Q9Z0H3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm7851-201ENSMUST00000117574 323 ntBASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm44124-201ENSMUST00000204159 472 ntBASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm8959-201ENSMUST00000213150 571 ntBASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm2553-201ENSMUST00000215986 605 ntBASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms