Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smco4Q9JIS3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm24589-201ENSMUST00000116692 94 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm15460-201ENSMUST00000118147 391 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm14760-201ENSMUST00000121831 999 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm8116-201ENSMUST00000182917 1201 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Mir8098-201ENSMUST00000184011 137 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smco4Q9JIS3 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms