Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm13916-201ENSMUST00000117368 628 ntBASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm15881-201ENSMUST00000148792 942 ntBASIC12.03□□□□□ -0.48
OtofQ9ESF1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.03□□□□□ -0.48
OtofQ9ESF1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.03□□□□□ -0.48
OtofQ9ESF1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm45219-201ENSMUST00000205602 465 ntBASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.03□□□□□ -0.48
OtofQ9ESF1 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.03□□□□□ -0.48
OtofQ9ESF1 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
OtofQ9ESF1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
OtofQ9ESF1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
OtofQ9ESF1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
OtofQ9ESF1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
OtofQ9ESF1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
OtofQ9ESF1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
OtofQ9ESF1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
OtofQ9ESF1 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.02□□□□□ -0.48
OtofQ9ESF1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
OtofQ9ESF1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.02□□□□□ -0.48
OtofQ9ESF1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.02□□□□□ -0.48
OtofQ9ESF1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Gm23045-201ENSMUST00000175041 96 ntBASIC12.02□□□□□ -0.49
OtofQ9ESF1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.02□□□□□ -0.49
OtofQ9ESF1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
OtofQ9ESF1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.02□□□□□ -0.49
OtofQ9ESF1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
OtofQ9ESF1 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.01□□□□□ -0.49
OtofQ9ESF1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
OtofQ9ESF1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
OtofQ9ESF1 Gm22920-201ENSMUST00000102175 109 ntBASIC12.01□□□□□ -0.49
OtofQ9ESF1 Gm12419-201ENSMUST00000116649 636 ntBASIC12.01□□□□□ -0.49
OtofQ9ESF1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 200.6 ms