Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Gm28631-201ENSMUST00000190740 334 ntBASIC11.7□□□□□ -0.54
Ube4bQ9ES00 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm38223-201ENSMUST00000194484 695 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm44855-201ENSMUST00000205725 362 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm6218-201ENSMUST00000219812 628 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube4bQ9ES00 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gm15371-201ENSMUST00000117057 784 ntBASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.68□□□□□ -0.54
Ube4bQ9ES00 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.68□□□□□ -0.54
Ube4bQ9ES00 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube4bQ9ES00 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms