Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm26956-201ENSMUST00000182176 986 ntBASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb3Q9ERD7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Mir877-201ENSMUST00000104738 85 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gm15808-201ENSMUST00000119046 604 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gm17376-201ENSMUST00000166016 84 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb3Q9ERD7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms