Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm14109-201ENSMUST00000118814 309 ntBASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2aQ9DB34 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Chmp2aQ9DB34 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Matn2-203ENSMUST00000226766 3252 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm44967-201ENSMUST00000207047 631 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms