Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Gm2128-201ENSMUST00000108009 2560 ntBASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp5Q9D7S9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp5Q9D7S9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp5Q9D7S9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp5Q9D7S9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp5Q9D7S9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp5Q9D7S9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp5Q9D7S9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Gm24830-201ENSMUST00000102024 166 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Gm15806-201ENSMUST00000120696 955 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Gm45925-201ENSMUST00000218882 744 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Gm26232-201ENSMUST00000083360 166 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.2■□□□□ 0.02
Chmp5Q9D7S9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm13736-201ENSMUST00000119272 253 ntBASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm27682-201ENSMUST00000183930 110 ntBASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Gm5904-201ENSMUST00000210286 865 ntBASIC15.19■□□□□ 0.02
Chmp5Q9D7S9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms