Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Gm22018-201ENSMUST00000104357 131 ntBASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Gm12384-201ENSMUST00000119228 919 ntBASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Gm4986-201ENSMUST00000119731 549 ntBASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4cQ9D7F7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Gm9083-201ENSMUST00000120423 819 ntBASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Gm8018-201ENSMUST00000173536 789 ntBASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4cQ9D7F7 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm23931-201ENSMUST00000103842 109 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm13829-201ENSMUST00000119600 138 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm13875-201ENSMUST00000120162 282 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms