Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm11425-201ENSMUST00000119608 498 ntBASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm43118-201ENSMUST00000199149 775 ntBASIC14.22□□□□□ -0.13
Ccdc7Q9D541 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm9396-201ENSMUST00000076703 567 ntBASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7Q9D541 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Paupar-201ENSMUST00000194826 3482 ntBASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Gm11793-201ENSMUST00000120433 981 ntBASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Gm7046-201ENSMUST00000221351 977 ntBASIC14.21□□□□□ -0.13
Ccdc7Q9D541 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7Q9D541 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc7Q9D541 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc7Q9D541 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ccdc7Q9D541 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc7Q9D541 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc7Q9D541 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc7Q9D541 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms