Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cfap53Q9D439 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Gm42693-201ENSMUST00000196779 631 ntBASIC13.4□□□□□ -0.26
Cfap53Q9D439 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.4□□□□□ -0.26
Cfap53Q9D439 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Gm7399-201ENSMUST00000032395 858 ntBASIC13.4□□□□□ -0.26
Cfap53Q9D439 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cfap53Q9D439 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cfap53Q9D439 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cfap53Q9D439 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm12241-201ENSMUST00000118330 726 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm27390-201ENSMUST00000184516 176 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm8227-201ENSMUST00000223306 571 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cfap53Q9D439 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cfap53Q9D439 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.39□□□□□ -0.27
Cfap53Q9D439 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm11531-201ENSMUST00000117614 555 ntBASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm42937-201ENSMUST00000197360 752 ntBASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm5950-201ENSMUST00000213337 772 ntBASIC13.38□□□□□ -0.27
Cfap53Q9D439 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms