Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm24891-201ENSMUST00000104391 136 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm12164-201ENSMUST00000121695 551 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm10051-201ENSMUST00000145209 414 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm23085-201ENSMUST00000157849 293 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm27530-201ENSMUST00000184096 98 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stag1Q9D3E6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Stag1Q9D3E6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Gm14724-201ENSMUST00000118400 537 ntBASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Gm8100-201ENSMUST00000182906 988 ntBASIC14.52□□□□□ -0.09
Stag1Q9D3E6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Gm44882-201ENSMUST00000205702 802 ntBASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Stag1Q9D3E6 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.51□□□□□ -0.09
Stag1Q9D3E6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Gm44124-201ENSMUST00000204159 472 ntBASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms