Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 BC043934-202ENSMUST00000185694 2356 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gm24231-201ENSMUST00000104315 133 ntBASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim42Q9D2H5 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm14057-201ENSMUST00000120631 482 ntBASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.23□□□□□ -0.45
Trim42Q9D2H5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim42Q9D2H5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms