Protein–RNA interactions for Protein: Q9CY34

Ube2f, NEDD8-conjugating enzyme UBE2F, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fQ9CY34 Gm13829-201ENSMUST00000119600 138 ntBASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.12□□□□□ -0.63
Ube2fQ9CY34 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ube2fQ9CY34 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.12□□□□□ -0.63
Ube2fQ9CY34 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm12341-201ENSMUST00000119724 503 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm16296-201ENSMUST00000159905 325 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm16372-201ENSMUST00000073088 450 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2fQ9CY34 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2fQ9CY34 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms